FastQCFastQC Report
Wed 18 Jan 2023
DRR016938.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameDRR016938.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14578447
Sequences flagged as poor quality0
Sequence length36
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC6600.012.1230318
TTCCGAT7750.010.5114097
CCGATCT8400.09.6984249
CGATCTA3851.9399522E-87.557265810
CTTCCGA12550.07.30279736
ACGCTCT10800.07.29431631
ACACGTC11750.06.437528614
AGATCGG12650.05.8815831
CGTCTGA13800.05.69087417
ATCGGAA13500.05.496663
CGCTCTT16500.05.4670792
GATCGGA13550.05.36881352
TCTTCCG16700.05.3146285
Produced by FastQC (version 0.11.5)